Composite

Part:BBa_K4399009

Designed by: Duoqing LIN   Group: iGEM22_Worldshaper-Shanghai   (2022-09-27)


PLexA35S-SbMYB75-Thsp18.2

Induciable expression box of SbMYB75 (BBa_K4399003).

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal PstI site found at 17
    Illegal PstI site found at 1437
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal PstI site found at 17
    Illegal PstI site found at 1437
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 1371
    Illegal BamHI site found at 805
    Illegal BamHI site found at 1107
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal PstI site found at 17
    Illegal PstI site found at 1437
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal PstI site found at 17
    Illegal PstI site found at 1437
  • 1000
    COMPATIBLE WITH RFC[1000]

Results

The DNA elements (golden gate compatible, PLexA35S (BBa_K3900024), SbMYB75 (BBa_K4399003), Thsp18.2 (BBa_K4399006)) were synthesized by Gensript based on their sequences and sub-cloned into pUC57 (level-0 vectors). The three level-0 vectors were then used to construct Level-1 vector: pEC47742: PLexA35S-SbMYB75- Thsp18.2( BBa_K4399009), according to the protocol:

PCR reaction system of level-1 vector BBa_K4399009 construction
volume / μL
level-1 empty vector (200 ng/μL) 1.0
promoter 1.5
CDS 1.5
terminator 1.5
NEB T4 buffer 1.5
BSA (10×) 1.5
T4 ligase 0.5
BsaI 0.5
ddH2O 10.0
the whole volume 20.0

The reaction ware incubated in a thermocyler for: 37℃ 3 min, 16 ℃ 4 min, 32 cycles;16℃ 15 min;50℃ 5 min,80℃ 5 min. 10 ul of the liagations were used to transform E. coli. Positive clines were then confirmed by PCR and sequencing (Fig 1):

Fig 1. Nucleic acid gel electrophoresis results of BBa_K4399009. Line 1, negative control; Line 2, positive control; Line 3-6, PCR results of 4 single colonies of BBa_K4399009 using PLexA35S (BBa_K3900024) forward primer and SbMYB75 (BBa_K4399003) reverse primer; Line 7, marker.


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